Description : e3 ubiquitin-protein ligase sdir1
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Nicotiana release: A4A49_41691 | |
Cluster | HCCA clusters: Cluster_46 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.G00930.1 | No alias | E3 ubiquitin ligase *(SNIPER) | 0.04 | Orthogroups_2024-Update | |
Brara.H00234.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Glyma.02G108300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU0Hr1G002870.3 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU6Hr1G034800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G072430.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os03g22830 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os12g04450 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
MA_77269g0010 | No alias | (at3g46620 : 139.0) zinc finger (C3HC4-type RING finger)... | 0.05 | Orthogroups_2024-Update | |
PSME_00002061-RA | No alias | (at3g19950 : 146.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
PSME_00021656-RA | No alias | (at3g46620 : 181.0) zinc finger (C3HC4-type RING finger)... | 0.03 | Orthogroups_2024-Update | |
PSME_00056956-RA | No alias | (at2g40830 : 186.0) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
Seita.2G181600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.5G351000.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Seita.8G172700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sopen03g029300 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
Sopen04g004300 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 192 | 234 |
No external refs found! |