A4A49_42233

Description : putative e3 ubiquitin-protein ligase rhc1a

Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_42233
Cluster	HCCA clusters: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method
129201	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g38870	No alias	RING/U-box superfamily protein	0.04	Orthogroups_2024-Update
Glyma.12G131800	No alias	RING/U-box superfamily protein	0.05	Orthogroups_2024-Update
LOC_Os03g26420	No alias	zinc finger, C3HC4 type domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g37230	No alias	zinc finger, C3HC4 type domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_474338g0010	No alias	(at2g39720 : 83.2) Encodes a putative RING-H2 finger...	0.03	Orthogroups_2024-Update
Potri.002G085800	No alias	RING/U-box superfamily protein	0.04	Orthogroups_2024-Update
Potri.013G116000	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
Seita.3G157000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G351000.1	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Seita.6G176300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc01g104260	No alias	RING/U-box superfamily protein, putative (AHRD V3.3 ***...	0.05	Orthogroups_2024-Update
Sopen07g026890	No alias	Ring finger domain	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	InterProScan predictions
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR039525	RNF126-like_zinc-ribbon	16	49
IPR001841	Znf_RING	234	276

External Links

No external refs found!