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  5. Potri.001G231000

Potri.001G231000


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G231000
Cluster HCCA clusters: cluster_0085

Target Alias Description ECC score Gene Family Method Actions
A4A49_11116 No alias putative e3 ubiquitin-protein ligase rhc1a 0.03 Orthogroups_2024-Update
A4A49_15281 No alias putative e3 ubiquitin-protein ligase rhc1a 0.02 Orthogroups_2024-Update
Bradi3g34010 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g38870 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.J02450.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.20G149700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os12g04090 No alias zinc finger, C3HC4 type domain containing protein 0.02 Orthogroups_2024-Update
Seita.4G253600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G224300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G199100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen08g021220 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 10 42
IPR001841 Znf_RING 109 150
No external refs found!