Potri.001G270100

Description : RAB GTPase homolog A4D

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G270100
Cluster	HCCA clusters: cluster_0048

Target	Alias	Description	ECC score	Gene Family Method
A4A49_29337	No alias	ras-related protein raba3	0.04	Orthogroups_2024-Update
At1g16920	No alias	RABA1b [Source:UniProtKB/TrEMBL;Acc:A0A178WJV5]	0.03	Orthogroups_2024-Update
Bradi2g49900	No alias	RAB GTPase homolog A1B	0.02	Orthogroups_2024-Update
Brara.B02845.1	No alias	A-class RAB GTPase	0.04	Orthogroups_2024-Update
Brara.F00618.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
GRMZM2G029486	No alias	RAB GTPase 11C	0.03	Orthogroups_2024-Update
GRMZM2G061912	No alias	RAB GTPase homolog A2B	0.04	Orthogroups_2024-Update
Glyma.12G165400	No alias	RAB GTPase 11C	0.03	Orthogroups_2024-Update
HORVU5Hr1G120210.4	No alias	A-class RAB GTPase	0.04	Orthogroups_2024-Update
LOC_Os01g54590	No alias	ras-related protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g62600	No alias	ras-related protein, putative, expressed	0.03	Orthogroups_2024-Update
Seita.9G248600.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Sobic.001G031900.2	No alias	A-class RAB GTPase	0.02	Orthogroups_2024-Update
Sobic.009G089700.1	No alias	A-class RAB GTPase	0.02	Orthogroups_2024-Update
Sopen03g002280	No alias	Ras family	0.02	Orthogroups_2024-Update
Sopen07g026930	No alias	Ras family	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	18	178

External Links

No external refs found!