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  5. Sopen11g025790

Sopen11g025790


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g025790
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Bradi2g37130 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.06G206400 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Glyma.15G076000 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G119110.4 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Pp1s26_282V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Sopen04g026890 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 71 126
No external refs found!