Potri.001G370300

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G370300
Cluster	HCCA clusters: cluster_0048

Target	Alias	Description	ECC score	Gene Family Method
A4A49_58689	No alias	heterogeneous nuclear ribonucleoprotein 1	0.03	Orthogroups_2024-Update
At4g14300	No alias	Heterogeneous nuclear ribonucleoprotein 1...	0.04	Orthogroups_2024-Update
Cre07.g330300	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.03	Orthogroups_2024-Update
GRMZM2G144890	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.04	Orthogroups_2024-Update
Sopen10g002010	No alias	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.02	Orthogroups_2024-Update
evm.model.tig00001130.27	No alias	(at5g55550 : 194.0) RNA-binding (RRM/RBD/RNP motifs)...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	21	88
IPR000504	RRM_dom	109	170

External Links

No external refs found!