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  5. Sopen11g027830

Sopen11g027830


Description : Elongation factor Tu GTP binding domain


Gene families : OG_42_0000485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g027830
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
169717 No alias GTP binding Elongation factor Tu family protein 0.09 Orthogroups_2024-Update
171512 No alias GTP binding Elongation factor Tu family protein 0.16 Orthogroups_2024-Update
270693 No alias GTP binding Elongation factor Tu family protein 0.04 Orthogroups_2024-Update
AC233866.1_FG006 No alias GTP binding Elongation factor Tu family protein 0.11 Orthogroups_2024-Update
At5g60390 No alias Elongation factor 1-alpha 4... 0.03 Orthogroups_2024-Update
Bradi0012s00100 No alias GTP binding Elongation factor Tu family protein 0.27 Orthogroups_2024-Update
Bradi1g06851 No alias GTP binding Elongation factor Tu family protein 0.22 Orthogroups_2024-Update
Bradi1g06861 No alias GTP binding Elongation factor Tu family protein 0.17 Orthogroups_2024-Update
Bradi1g06870 No alias GTP binding Elongation factor Tu family protein 0.28 Orthogroups_2024-Update
Bradi1g65725 No alias GTP binding Elongation factor Tu family protein 0.17 Orthogroups_2024-Update
Bradi4g12750 No alias GTP binding Elongation factor Tu family protein 0.07 Orthogroups_2024-Update
Brara.B01038.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.34 Orthogroups_2024-Update
Brara.B01040.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.32 Orthogroups_2024-Update
Brara.C01040.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.36 Orthogroups_2024-Update
Brara.E01218.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.08 Orthogroups_2024-Update
Brara.H02895.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.15 Orthogroups_2024-Update
Brara.I05331.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.08 Orthogroups_2024-Update
Brara.J01398.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.15 Orthogroups_2024-Update
GRMZM2G001327 No alias GTP binding Elongation factor Tu family protein 0.12 Orthogroups_2024-Update
GRMZM2G057535 No alias GTP binding Elongation factor Tu family protein 0.06 Orthogroups_2024-Update
GRMZM2G110509 No alias GTP binding Elongation factor Tu family protein 0.05 Orthogroups_2024-Update
GRMZM2G149768 No alias GTP binding Elongation factor Tu family protein 0.15 Orthogroups_2024-Update
GRMZM2G151193 No alias GTP binding Elongation factor Tu family protein 0.16 Orthogroups_2024-Update
GRMZM2G153541 No alias GTP binding Elongation factor Tu family protein 0.09 Orthogroups_2024-Update
GRMZM2G154218 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
GRMZM2G343543 No alias GTP binding Elongation factor Tu family protein 0.05 Orthogroups_2024-Update
Glyma.05G089000 No alias GTP binding Elongation factor Tu family protein 0.09 Orthogroups_2024-Update
Glyma.05G114900 No alias GTP binding Elongation factor Tu family protein 0.13 Orthogroups_2024-Update
Glyma.17G186600 No alias GTP binding Elongation factor Tu family protein 0.03 Orthogroups_2024-Update
Glyma.19G052400 No alias GTP binding Elongation factor Tu family protein 0.09 Orthogroups_2024-Update
HORVU0Hr1G017020.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.1 Orthogroups_2024-Update
HORVU2Hr1G013680.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.04 Orthogroups_2024-Update
HORVU4Hr1G056740.5 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.09 Orthogroups_2024-Update
HORVU4Hr1G056820.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
HORVU4Hr1G056830.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.06 Orthogroups_2024-Update
HORVU5Hr1G100200.3 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.06 Orthogroups_2024-Update
HORVU5Hr1G100700.3 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.09 Orthogroups_2024-Update
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.09 Orthogroups_2024-Update
Mp6g00950.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 Orthogroups_2024-Update
PSME_00035389-RA No alias (p34823|ef1a2_dauca : 304.0) Elongation factor 1-alpha... 0.02 Orthogroups_2024-Update
PSME_00051264-RA No alias (q03033|ef1a_wheat : 294.0) Elongation factor 1-alpha... 0.02 Orthogroups_2024-Update
Pp1s59_161V6 No alias elongation factor 1- 0.04 Orthogroups_2024-Update
Pp1s59_181V6 No alias elongation factor 1- 0.09 Orthogroups_2024-Update
Pp1s7_445V6 No alias elongation factor 1- 0.02 Orthogroups_2024-Update
Pp1s84_186V6 No alias elongation factor 1- 0.03 Orthogroups_2024-Update
Seita.3G265400.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.06 Orthogroups_2024-Update
Seita.3G265500.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.06 Orthogroups_2024-Update
Seita.3G265600.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.04 Orthogroups_2024-Update
Seita.3G265700.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.11 Orthogroups_2024-Update
Seita.3G265900.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.06 Orthogroups_2024-Update
Seita.9G442900.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.12 Orthogroups_2024-Update
Seita.9G443000.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.12 Orthogroups_2024-Update
Sobic.010G182100.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.33 Orthogroups_2024-Update
Sobic.010G182200.2 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.15 Orthogroups_2024-Update
Sobic.010G182300.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.36 Orthogroups_2024-Update
Sobic.010G182600.4 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.33 Orthogroups_2024-Update
Solyc06g005060 No alias elongation factor 1-alpha 0.17 Orthogroups_2024-Update
Solyc06g009960 No alias Elongation factor 1-alpha (AHRD V3.3 *-* EF1A_SOLLC) 0.07 Orthogroups_2024-Update
Solyc06g009970 No alias Elongation factor 1-alpha (AHRD V3.3 *** EF1A_SOLLC) 0.04 Orthogroups_2024-Update
evm.model.contig_509.2 No alias (p25698|ef1a_soybn : 335.0) Elongation factor 1-alpha... 0.4 Orthogroups_2024-Update
evm.model.tig00021352.57 No alias (o64937|ef1a_orysa : 717.0) Elongation factor 1-alpha... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
IPR000795 TF_GTP-bd_dom 7 222
IPR004161 EFTu-like_2 248 313
No external refs found!