Potri.002G085800

Description : RING/U-box superfamily protein

Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.002G085800
Cluster	HCCA clusters: cluster_0062

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36495	No alias	e3 ubiquitin-protein ligase aip2	0.03	Orthogroups_2024-Update
A4A49_42233	No alias	putative e3 ubiquitin-protein ligase rhc1a	0.04	Orthogroups_2024-Update
At2g40830	No alias	Probable E3 ubiquitin-protein ligase RHC1A...	0.03	Orthogroups_2024-Update
Bradi3g56300	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
Cre10.g422050	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G021480	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G122848	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
Glyma.04G251600	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os03g26420	No alias	zinc finger, C3HC4 type domain containing protein, expressed	0.02	Orthogroups_2024-Update
Potri.003G145800	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
Seita.6G190900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.8G028200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G371300.1	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	InterProScan predictions
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	252	294
IPR039525	RNF126-like_zinc-ribbon	18	52

External Links

No external refs found!