1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.002G090400

Potri.002G090400


Description : Rhomboid-related intramembrane serine protease family protein


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G090400
Cluster HCCA clusters: cluster_0039

Target Alias Description ECC score Gene Family Method Actions
Bradi2g03110 No alias RHOMBOID-like 1 0.02 Orthogroups_2024-Update
Brara.J02499.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Glyma.07G132800 No alias RHOMBOID-like 1 0.03 Orthogroups_2024-Update
Glyma.18G181800 No alias RHOMBOID-like 1 0.03 Orthogroups_2024-Update
LOC_Os08g43320 No alias OsRhmbd14 - Putative Rhomboid homologue, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47840 No alias OsRhmbd18 - Putative Rhomboid homologue, expressed 0.03 Orthogroups_2024-Update
MA_128457g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00025300-RA No alias (at2g29050 : 129.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00033639-RA No alias (at2g29050 : 182.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00037775-RA No alias (at2g29050 : 364.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00049830-RA No alias (at2g29050 : 216.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.03 Orthogroups_2024-Update
Pp1s84_202V6 No alias membrane protein 0.02 Orthogroups_2024-Update
Pp1s9_388V6 No alias membrane protein 0.02 Orthogroups_2024-Update
Seita.9G349500.1 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
Seita.9G567800.1 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
Sobic.001G321800.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Sobic.001G532200.1 No alias protease *(RBL) 0.01 Orthogroups_2024-Update
Sopen03g004920 No alias Rhomboid family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 158 298
No external refs found!