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  5. Sopen11g029840

Sopen11g029840


Description : EF-1 guanine nucleotide exchange domain


Gene families : OG_42_0001570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001570_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g029840
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
94371 No alias Glutathione S-transferase, C-terminal-like;Translation... 0.03 Orthogroups_2024-Update
A4A49_22322 No alias elongation factor 1-beta 0.04 Orthogroups_2024-Update
Bradi1g18710 No alias Glutathione S-transferase, C-terminal-like;Translation... 0.03 Orthogroups_2024-Update
Bradi1g21550 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.08 Orthogroups_2024-Update
Brara.B00827.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 Orthogroups_2024-Update
Brara.C00882.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 Orthogroups_2024-Update
Brara.H01903.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.08 Orthogroups_2024-Update
Brara.J01635.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 Orthogroups_2024-Update
GRMZM2G153569 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.03 Orthogroups_2024-Update
Glyma.06G170900 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.05 Orthogroups_2024-Update
HORVU2Hr1G022090.4 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 Orthogroups_2024-Update
HORVU2Hr1G031450.6 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 Orthogroups_2024-Update
Kfl00055_0060 kfl00055_0060_v1.1 (at1g30230 : 185.0) Glutathione S-transferase,... 0.02 Orthogroups_2024-Update
LOC_Os07g46750 No alias elongation factor protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_102713g0020 No alias (q40680|ef1d1_orysa : 235.0) Elongation factor 1-delta 1... 0.06 Orthogroups_2024-Update
Mp8g01660.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.08 Orthogroups_2024-Update
PSME_00005810-RA No alias (q40680|ef1d1_orysa : 255.0) Elongation factor 1-delta 1... 0.02 Orthogroups_2024-Update
Seita.2G386600.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.08 Orthogroups_2024-Update
Seita.2G421400.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.11 Orthogroups_2024-Update
Sobic.002G373800.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 Orthogroups_2024-Update
Sobic.002G406500.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.11 Orthogroups_2024-Update
Solyc01g098000 No alias Elongation factor 1-beta (AHRD V3.3 *** D7KES3_ARALL) 0.03 Orthogroups_2024-Update
Solyc07g016150 No alias Elongation factor 1-beta (AHRD V3.3 *** A0A072UHR3_MEDTR) 0.06 Orthogroups_2024-Update
Solyc11g072190 No alias Elongation factor 1-beta', putative (AHRD V3.3 *** Q6L4C2_SOLDE) 0.08 Orthogroups_2024-Update
evm.model.tig00001126.9 No alias (at1g30230 : 81.6) Glutathione S-transferase,... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA InterProScan predictions
BP GO:0006414 translational elongation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR014038 EF1B_bsu/dsu_GNE 140 227
No external refs found!