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  5. Potri.003G082500

Potri.003G082500


Description : Plant VAMP (vesicle-associated membrane protein) family protein


Gene families : OG_42_0000404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.003G082500
Cluster HCCA clusters: cluster_0018

Target Alias Description ECC score Gene Family Method Actions
Brara.B02949.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update
Brara.C02283.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update
GRMZM2G074173 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.02 Orthogroups_2024-Update
GRMZM5G876973 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.03 Orthogroups_2024-Update
Kfl00193_0170 kfl00193_0170_v1.... (at3g60600 : 183.0) Encodes VAP27 (for... 0.01 Orthogroups_2024-Update
LOC_Os01g71050 No alias MSP domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g42940 No alias MSP domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.014G059500 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.03 Orthogroups_2024-Update
Pp1s274_75V6 No alias vesicle-associated membrane 0.03 Orthogroups_2024-Update
Seita.7G192400.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update
Sobic.004G298200.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update
Sobic.004G302800.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000535 MSP_dom 10 105
No external refs found!