Potri.004G031300

Description : histone H2A 2

Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.004G031300
Cluster	HCCA clusters: cluster_0087

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g23090	No alias	histone H2A 12	0.03	Orthogroups_2024-Update
Cre06.g264950	No alias	histone H2A 10	0.02	Orthogroups_2024-Update
Cre17.g709200	No alias	histone H2A 10	0.01	Orthogroups_2024-Update
Pp1s72_85V6	No alias	histone h2a	0.02	Orthogroups_2024-Update
Sopen03g001250	No alias	Core histone H2A/H2B/H3/H4	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	93	124
IPR007125	Histone_H2A/H2B/H3	14	90

External Links

No external refs found!