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  5. Potri.004G033700

Potri.004G033700


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G033700
Cluster HCCA clusters: cluster_0012

Target Alias Description ECC score Gene Family Method Actions
At1g11590 No alias Probable pectinesterase/pectinesterase inhibitor 19... 0.02 Orthogroups_2024-Update
At2g36700 No alias Putative pectinesterase 14... 0.03 Orthogroups_2024-Update
At5g19730 No alias Probable pectinesterase 53... 0.02 Orthogroups_2024-Update
Bradi2g44500 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Brara.B00244.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Brara.I00335.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.01G006800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.06 Orthogroups_2024-Update
HORVU5Hr1G022590.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
MA_101720g0010 No alias (at3g29090 : 389.0) Encodes an atypical pectin... 0.03 Orthogroups_2024-Update
MA_10267810g0010 No alias (at5g47500 : 480.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_10428625g0010 No alias (at3g29090 : 374.0) Encodes an atypical pectin... 0.02 Orthogroups_2024-Update
PSME_00007923-RA No alias (at5g19730 : 228.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Potri.012G115200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s23_141V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s45_249V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s55_167V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.7G192100.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.005G217101.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.008G131300.1 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Solyc12g008530 No alias Pectinesterase (AHRD V3.3 *** K4DBU1_SOLLC) 0.02 Orthogroups_2024-Update
Sopen02g029180 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 39 290
No external refs found!