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  5. Sopen12g003340

Sopen12g003340


Description : Cotton fibre expressed protein


Gene families : OG_42_0000960 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000960_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g003340
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_01273 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_05935 No alias hypothetical protein 0.05 Orthogroups_2024-Update
A4A49_29076 No alias hypothetical protein 0.05 Orthogroups_2024-Update
A4A49_59245 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Glyma.08G034400 No alias Function unknown 0.05 Orthogroups_2024-Update
Potri.014G139900 No alias Function unknown 0.04 Orthogroups_2024-Update
Seita.3G072400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G439600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G165200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc12g008380 No alias LOW QUALITY:Avr9/Cf-9 rapidly elicited protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008480 DUF761_pln 184 205
No external refs found!