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  5. Sopen12g006100

Sopen12g006100


Description : Tetratricopeptide repeat


Gene families : OG_42_0006221 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006221_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g006100
Cluster HCCA clusters: Cluster_349

Target Alias Description ECC score Gene Family Method Actions
Pp1s402_27V6 No alias cell division 0.02 Orthogroups_2024-Update
evm.model.contig_3468.15 No alias (at1g78770 : 99.8) anaphase promoting complex 6 (APC6);... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019734 TPR_repeat 488 519
IPR019734 TPR_repeat 132 161
No external refs found!