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  5. Potri.005G154000

Potri.005G154000


Description : MSCS-like 3


Gene families : OG_42_0000878 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G154000
Cluster HCCA clusters: cluster_0018

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G023200 No alias MSCS-like 2 0.04 Orthogroups_2024-Update
Glyma.09G199100 No alias MSCS-like 2 0.03 Orthogroups_2024-Update
HORVU3Hr1G036350.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G002510.1 No alias mechanosensitive ion channel *(MSL) 0.02 Orthogroups_2024-Update
Pp1s58_129V6 No alias MscS-Like mechanosensitive ion channel MSCL10 0.02 Orthogroups_2024-Update
Pp1s79_156V6 No alias MscS-Like mechanosensitive ion channel MSCL9 0.02 Orthogroups_2024-Update
Solyc11g010610 No alias Mechanosensitive ion channel-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen11g005410 No alias Mechanosensitive ion channel 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006685 MscS_channel 239 446
No external refs found!