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  5. Potri.005G190000

Potri.005G190000


Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G190000
Cluster HCCA clusters: cluster_0057

Target Alias Description ECC score Gene Family Method Actions
At5g12350 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
LOC_Os05g31920 No alias FYVE zinc finger domain containing protein, expressed 0.02 Orthogroups_2024-Update
Sobic.003G438900.1 No alias regulatory protein *(RLD) of gravity sensing 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 466 513
IPR000408 Reg_chr_condens 404 452
IPR000408 Reg_chr_condens 572 619
IPR000408 Reg_chr_condens 349 399
IPR000408 Reg_chr_condens 297 345
IPR000408 Reg_chr_condens 519 567
IPR000306 Znf_FYVE 623 689
IPR027988 BRX_N 874 908
IPR001849 PH_domain 15 123
IPR013591 Brevis_radix_dom 1031 1086
No external refs found!