Potri.006G125500

Description : ATPase, AAA-type, CDC48 protein

Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.006G125500
Cluster	HCCA clusters: cluster_0003

Target	Alias	Description	ECC score	Gene Family Method
At3g09840	No alias	AT3G09840 protein [Source:UniProtKB/TrEMBL;Acc:B9DI55]	0.03	Orthogroups_2024-Update
Bradi1g74916	No alias	ATPase, AAA-type, CDC48 protein	0.02	Orthogroups_2024-Update
Glyma.18G117900	No alias	ATPase, AAA-type, CDC48 protein	0.02	Orthogroups_2024-Update
Glyma.19G183400	No alias	ATPase, AAA-type, CDC48 protein	0.03	Orthogroups_2024-Update
MA_9824554g0010	No alias	(p54774\|cdc48_soybn : 416.0) Cell division cycle protein...	0.02	Orthogroups_2024-Update
PSME_00018599-RA	No alias	(at5g03340 : 512.0) ATPase, AAA-type, CDC48 protein;...	0.01	Orthogroups_2024-Update
PSME_00037383-RA	No alias	(at5g03340 : 700.0) ATPase, AAA-type, CDC48 protein;...	0.03	Orthogroups_2024-Update
PSME_00048431-RA	No alias	(p54774\|cdc48_soybn : 494.0) Cell division cycle protein...	0.01	Orthogroups_2024-Update
Pp1s99_139V6	No alias	transitional endoplasmic reticulum	0.03	Orthogroups_2024-Update
Sobic.001G236300.1	No alias	platform ATPase CDC48	0.05	Orthogroups_2024-Update
Solyc10g084050	No alias	cell division cycle 48 (AHRD V3.3 *** AT3G09840.1)	0.04	Orthogroups_2024-Update
Sopen10g033500	No alias	ATPase family associated with various cellular activities (AAA)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004201	Cdc48_dom2	134	196
IPR003959	ATPase_AAA_core	520	653
IPR003959	ATPase_AAA_core	247	376
IPR003338	CDC4_N-term_subdom	32	113

External Links

No external refs found!