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  5. Potri.006G173600

Potri.006G173600


Description : CONSTANS-like 5


Gene families : OG_42_0000725 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G173600
Cluster HCCA clusters: cluster_0114

Target Alias Description ECC score Gene Family Method Actions
At3g02380 No alias Zinc finger protein CONSTANS-LIKE 2... 0.03 Orthogroups_2024-Update
GRMZM2G405368 No alias CONSTANS-like 2 0.02 Orthogroups_2024-Update
Kfl00103_0190 kfl00103_0190_v1.... (at5g24930 : 204.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.02 Orthogroups_2024-Update
LOC_Os02g39710 No alias CCT/B-box zinc finger protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_54929g0010 No alias (at5g24930 : 142.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00015948-RA No alias (at5g24930 : 259.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.04 Orthogroups_2024-Update
Seita.4G192300.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G135100.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Sopen02g034250 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen07g002740 No alias CCT motif 0.03 Orthogroups_2024-Update
evm.model.contig_482.9 No alias (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 20 63
IPR000315 Znf_B-box 65 110
IPR010402 CCT_domain 311 353
No external refs found!