1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.006G274700

Potri.006G274700


Description : RING/U-box superfamily protein


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G274700
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
A4A49_05648 No alias putative e3 ubiquitin-protein ligase hip1 0.03 Orthogroups_2024-Update
A4A49_16231 No alias e3 ubiquitin-protein ligase mbr1 0.02 Orthogroups_2024-Update
At5g42940 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.03 Orthogroups_2024-Update
Bradi5g20760 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Brara.D02257.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F00132.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Brara.F03830.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G02303.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G053909 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G134600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G180000 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G024190.2 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os05g47670 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
Seita.7G262700.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G272600.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc10g007140 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G53190.2) 0.03 Orthogroups_2024-Update
Solyc12g096420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) 0.03 Orthogroups_2024-Update
Sopen01g050100 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.tig00000319.12 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 500 542
No external refs found!