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  5. Potri.008G097900

Potri.008G097900


Description : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.008G097900
Cluster HCCA clusters: cluster_0012

Target Alias Description ECC score Gene Family Method Actions
At5g43270 No alias Squamosa promoter-binding-like protein 2... 0.04 Orthogroups_2024-Update
At5g50570 No alias Squamosa promoter-binding-like protein 13B... 0.04 Orthogroups_2024-Update
Cre07.g345050 No alias squamosa promoter binding protein-like 10 0.02 Orthogroups_2024-Update
GRMZM5G806833 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.03G117500 No alias squamosa promoter binding protein-like 8 0.03 Orthogroups_2024-Update
Glyma.07G109600 No alias squamosa promoter binding protein-like 8 0.02 Orthogroups_2024-Update
Glyma.13G274900 No alias squamosa promoter-binding protein-like 12 0.04 Orthogroups_2024-Update
HORVU0Hr1G020810.1 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU1Hr1G060750.1 No alias Unknown function 0.01 Orthogroups_2024-Update
LOC_Os07g32170 No alias OsSPL13 - SBP-box gene family member, expressed 0.02 Orthogroups_2024-Update
MA_20537g0010 No alias (at1g02065 : 148.0) Encodes an SBP-box gene, a member of... 0.02 Orthogroups_2024-Update
MA_47367g0010 No alias (at1g02065 : 173.0) Encodes an SBP-box gene, a member of... 0.03 Orthogroups_2024-Update
Mp1g10020.1 No alias transcription factor (SBP) 0.02 Orthogroups_2024-Update
PSME_00051919-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.001G055900 No alias squamosa promoter binding protein-like 2 0.03 Orthogroups_2024-Update
Sopen03g033930 No alias SBP domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 165 238
No external refs found!