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  5. Sopen12g016080

Sopen12g016080


Description : SAC3/GANP/Nin1/mts3/eIF-3 p25 family


Gene families : OG_42_0002266 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g016080
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
A4A49_29466 No alias sac3 family protein c 0.02 Orthogroups_2024-Update
Bradi1g19627 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.02 Orthogroups_2024-Update
Cre02.g143600 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.01 Orthogroups_2024-Update
Glyma.13G211900 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.02 Orthogroups_2024-Update
Mp6g17060.1 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.02 Orthogroups_2024-Update
Seita.2G412700.1 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.02 Orthogroups_2024-Update
Sobic.002G397500.2 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.02 Orthogroups_2024-Update
evm.model.tig00001278.20 No alias (at3g54380 : 83.6) SAC3/GANP/Nin1/mts3/eIF-3 p25 family;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005062 SAC3/GANP/THP3 392 690
No external refs found!