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  5. Potri.012G036700

Potri.012G036700


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.012G036700
Cluster HCCA clusters: cluster_0056

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62350 No alias RING-H2 finger C1A 0.04 Orthogroups_2024-Update
Glyma.10G089800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G105900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G218200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G096110.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os06g42700 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g06740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.019G086500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.4G253600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G074600.2 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc01g009000 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.03 Orthogroups_2024-Update
evm.model.contig_4465.8 No alias (at3g19950 : 80.5) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 11 44
IPR001841 Znf_RING 200 242
No external refs found!