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  5. Potri.012G095000

Potri.012G095000


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.012G095000
Cluster HCCA clusters: cluster_0012

Target Alias Description ECC score Gene Family Method Actions
Bradi3g37300 No alias 4-coumarate:CoA ligase 2 0.04 Orthogroups_2024-Update
Brara.C03823.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
GRMZM2G122787 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Glyma.15G001700 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
MA_70509g0010 No alias (o24146|4cl2_tobac : 763.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
MA_8552247g0010 No alias (at4g05160 : 354.0) Encodes a peroxisomal protein... 0.02 Orthogroups_2024-Update
MA_8946476g0010 No alias (at1g62940 : 648.0) encodes an acyl-CoA synthetase, has... 0.03 Orthogroups_2024-Update
PSME_00011573-RA No alias (at4g05160 : 636.0) Encodes a peroxisomal protein... 0.03 Orthogroups_2024-Update
PSME_00013808-RA No alias (at1g20510 : 243.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00013809-RA No alias (at1g20510 : 678.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00015568-RA No alias (o24146|4cl2_tobac : 707.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
Potri.005G248500 No alias OPC-8:0 CoA ligase1 0.03 Orthogroups_2024-Update
Potri.017G033600 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Potri.T071600 No alias 4-coumarate:CoA ligase 5 0.03 Orthogroups_2024-Update
Seita.6G167900.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Sobic.004G062500.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Solyc03g117870 No alias 4-coumarate--CoA ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 465 540
IPR000873 AMP-dep_Synth/Lig 69 456
No external refs found!