1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen12g021800

Sopen12g021800


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family


Gene families : OG_42_0002151 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002151_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g021800
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
441919 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.24 Orthogroups_2024-Update
At2g32060 No alias 40S ribosomal protein S12... 0.07 Orthogroups_2024-Update
Bradi1g06520 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.19 Orthogroups_2024-Update
Bradi1g53740 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.28 Orthogroups_2024-Update
Brara.C01639.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Brara.D01947.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.16 Orthogroups_2024-Update
Brara.E01168.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.F01106.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.17 Orthogroups_2024-Update
Brara.H02521.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.15 Orthogroups_2024-Update
Brara.I04904.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.15 Orthogroups_2024-Update
Cre04.g214503 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.3 Orthogroups_2024-Update
GRMZM2G063340 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.13 Orthogroups_2024-Update
Glyma.07G023900 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.17 Orthogroups_2024-Update
Glyma.08G217700 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.1 Orthogroups_2024-Update
Glyma.13G369700 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.1 Orthogroups_2024-Update
Glyma.15G003700 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.12 Orthogroups_2024-Update
HORVU2Hr1G053290.6 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.13 Orthogroups_2024-Update
HORVU5Hr1G103330.3 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.18 Orthogroups_2024-Update
Kfl00170_0060 kfl00170_0060_v1.1 (q9xhs0|rs12_horvu : 207.0) 40S ribosomal protein S12 -... 0.12 Orthogroups_2024-Update
MA_16920g0010 No alias (q9xhs0|rs12_horvu : 225.0) 40S ribosomal protein S12 -... 0.06 Orthogroups_2024-Update
Mp7g11470.1 No alias component RPS12 of SSU proteome 0.02 Orthogroups_2024-Update
PSME_00017034-RA No alias (q9xhs0|rs12_horvu : 220.0) 40S ribosomal protein S12 -... 0.05 Orthogroups_2024-Update
Potri.001G046600 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.18 Orthogroups_2024-Update
Potri.002G056200 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.14 Orthogroups_2024-Update
Pp1s194_130V6 No alias 40s ribosomal protein s12 0.17 Orthogroups_2024-Update
Seita.1G205300.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update
Seita.2G088300.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.18 Orthogroups_2024-Update
Seita.3G235300.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Sobic.002G081600.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.26 Orthogroups_2024-Update
Sobic.009G144300.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.17 Orthogroups_2024-Update
Sobic.009G242400.1 No alias component *(eS12) of small ribosomal-subunit (SSU) proteome 0.35 Orthogroups_2024-Update
Solyc01g103800 No alias 40S ribosomal protein S12 (AHRD V3.3 *** K4B1V5_SOLLC) 0.14 Orthogroups_2024-Update
Solyc12g042650 No alias 40S ribosomal protein S12 (AHRD V3.3 *** M1CSI4_SOLTU) 0.38 Orthogroups_2024-Update
evm.model.contig_3478.2 No alias (q9xhs0|rs12_horvu : 146.0) 40S ribosomal protein S12 -... 0.45 Orthogroups_2024-Update
evm.model.tig00020903.34 No alias (q9xhs0|rs12_horvu : 149.0) 40S ribosomal protein S12 -... 0.23 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 27 120
No external refs found!