1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.013G111900

Potri.013G111900


Description : ATP-binding casette family G25


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.013G111900
Cluster HCCA clusters: cluster_0008

Target Alias Description ECC score Gene Family Method Actions
At3g25620 No alias ABC transporter G family member 21... 0.04 Orthogroups_2024-Update
Brara.A03279.1 No alias sporopollenin precursor exporter *(ABCG26) & subfamily... 0.03 Orthogroups_2024-Update
Brara.D00598.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.F03336.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Glyma.01G091100 No alias ABC-2 type transporter family protein 0.04 Orthogroups_2024-Update
Kfl00003_0100 kfl00003_0100_v1.1 (at1g31770 : 406.0) ATP-binding cassette 14 (ABCG14);... 0.02 Orthogroups_2024-Update
Kfl00050_0290 kfl00050_0290_v1.1 (at5g06530 : 526.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update
MA_81274g0010 No alias (at1g31770 : 438.0) ATP-binding cassette 14 (ABCG14);... 0.03 Orthogroups_2024-Update
PSME_00000106-RA No alias (at3g13220 : 667.0) Encodes a ATP-binding cassette... 0.03 Orthogroups_2024-Update
PSME_00019170-RA No alias (at5g06530 : 722.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update
Potri.011G123200 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Pp1s138_50V6 No alias white-brown-complex abc transporter family 0.02 Orthogroups_2024-Update
Seita.8G055700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.010G187300.1 No alias sporopollenin precursor exporter *(ABCG26) & subfamily... 0.03 Orthogroups_2024-Update
Sobic.010G187350.1 No alias sporopollenin precursor exporter *(ABCG26) & subfamily... 0.03 Orthogroups_2024-Update
Solyc08g005580 No alias ABC transporter family protein (AHRD V3.3 *** U5GKR9_POPTR) 0.03 Orthogroups_2024-Update
evm.model.tig00000692.51 No alias (at1g51460 : 166.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 387 592
IPR003439 ABC_transporter-like 86 236
No external refs found!