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  5. Sopen12g022910

Sopen12g022910


Description : Ribosomal L28e protein family


Gene families : OG_42_0002199 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g022910
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
164298 No alias Ribosomal L28e protein family 0.13 Orthogroups_2024-Update
A4A49_23451 No alias 60s ribosomal protein l28-1 0.06 Orthogroups_2024-Update
A4A49_64591 No alias 60s ribosomal protein l28-1 0.1 Orthogroups_2024-Update
At2g19730 No alias 60S ribosomal protein L28-1... 0.02 Orthogroups_2024-Update
At4g29410 No alias 60S ribosomal protein L28-2... 0.05 Orthogroups_2024-Update
Bradi2g18150 No alias Ribosomal L28e protein family 0.1 Orthogroups_2024-Update
Bradi2g47760 No alias Ribosomal L28e protein family 0.14 Orthogroups_2024-Update
Brara.A00789.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.17 Orthogroups_2024-Update
Brara.G00081.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.17 Orthogroups_2024-Update
Brara.H01443.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.I01133.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.I04724.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Cre11.g467578 No alias Ribosomal L28e protein family 0.15 Orthogroups_2024-Update
GRMZM2G088060 No alias Ribosomal L28e protein family 0.05 Orthogroups_2024-Update
Glyma.07G012800 No alias Ribosomal L28e protein family 0.05 Orthogroups_2024-Update
Glyma.08G196500 No alias Ribosomal L28e protein family 0.1 Orthogroups_2024-Update
Glyma.13G352100 No alias Ribosomal L28e protein family 0.06 Orthogroups_2024-Update
HORVU1Hr1G079370.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
HORVU3Hr1G066430.3 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Kfl00166_0150 kfl00166_0150_v1.1 (at4g29410 : 108.0) Ribosomal L28e protein family;... 0.09 Orthogroups_2024-Update
MA_10428490g0010 No alias (at2g19730 : 181.0) Ribosomal L28e protein family;... 0.08 Orthogroups_2024-Update
Mp1g26940.1 No alias component RPL28 of LSU proteome component 0.13 Orthogroups_2024-Update
PSME_00007702-RA No alias (at2g19730 : 186.0) Ribosomal L28e protein family;... 0.06 Orthogroups_2024-Update
Potri.001G194000 No alias Ribosomal L28e protein family 0.08 Orthogroups_2024-Update
Potri.T165500 No alias Ribosomal L28e protein family 0.05 Orthogroups_2024-Update
Pp1s505_8V6 No alias 60s ribosomal protein l28 0.17 Orthogroups_2024-Update
Pp1s7_390V6 No alias 60s ribosomal protein l28 0.11 Orthogroups_2024-Update
Pp1s98_65V6 No alias 60s ribosomal protein l28 0.08 Orthogroups_2024-Update
Seita.3G162800.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Seita.5G288600.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Sobic.003G272500.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Sobic.009G215200.2 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Solyc03g121330 No alias 60S ribosomal protein L28, putative (AHRD V3.3 *** B9RKC5_RICCO) 0.22 Orthogroups_2024-Update
Solyc06g062500 No alias 60S ribosomal protein L28, putative (AHRD V3.3 *** B9RKC5_RICCO) 0.03 Orthogroups_2024-Update
evm.model.contig_471.3 No alias no hits & (original description: no original description) 0.21 Orthogroups_2024-Update
evm.model.tig00020710.93 No alias no hits & (original description: no original description) 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029004 L28e/Mak16 8 128
No external refs found!