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  5. Potri.013G125000

Potri.013G125000


Description : homolog of carrot EP3-3 chitinase


Gene families : OG_42_0000525 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.013G125000
Cluster HCCA clusters: cluster_0008

Target Alias Description ECC score Gene Family Method Actions
A4A49_35699 No alias endochitinase ep3 0.05 Orthogroups_2024-Update
Brara.E00367.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00903.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G051943 No alias homolog of carrot EP3-3 chitinase 0.03 Orthogroups_2024-Update
GRMZM2G129189 No alias homolog of carrot EP3-3 chitinase 0.05 Orthogroups_2024-Update
HORVU2Hr1G085280.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g39330 No alias CHIT1 - Chitinase family protein precursor, expressed 0.02 Orthogroups_2024-Update
MA_102538g0010 No alias (p29022|chia_maize : 115.0) Endochitinase A precursor... 0.02 Orthogroups_2024-Update
MA_10427514g0010 No alias (p29022|chia_maize : 267.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
MA_191308g0010 No alias (at3g54420 : 235.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00018393-RA No alias (at3g54420 : 241.0) encodes an EP3 chitinase that is... 0.02 Orthogroups_2024-Update
PSME_00019563-RA No alias (at3g54420 : 211.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00026001-RA No alias (p29022|chia_maize : 260.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
PSME_00029190-RA No alias (p29022|chia_maize : 256.0) Endochitinase A precursor... 0.05 Orthogroups_2024-Update
PSME_00037516-RA No alias (at3g54420 : 211.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00037636-RA No alias (p29022|chia_maize : 228.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
PSME_00039570-RA No alias (p29023|chib_maize : 253.0) Endochitinase B precursor... 0.04 Orthogroups_2024-Update
PSME_00046774-RA No alias (at3g54420 : 162.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00050706-RA No alias (p29022|chia_maize : 237.0) Endochitinase A precursor... 0.04 Orthogroups_2024-Update
PSME_00050767-RA No alias (p29022|chia_maize : 240.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
PSME_00051412-RA No alias (at3g54420 : 249.0) encodes an EP3 chitinase that is... 0.02 Orthogroups_2024-Update
PSME_00052222-RA No alias (at3g54420 : 236.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00052568-RA No alias (p29022|chia_maize : 277.0) Endochitinase A precursor... 0.07 Orthogroups_2024-Update
Seita.1G225300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G150500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G150700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G132500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc04g072000 No alias Chitinase (AHRD V3.3 *** A0A1B1HY32_9APIA) 0.03 Orthogroups_2024-Update
Sopen06g018430 No alias Chitinase class I 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
MF GO:0008061 chitin binding IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 32 63
IPR000726 Glyco_hydro_19_cat 228 275
IPR000726 Glyco_hydro_19_cat 77 224
No external refs found!