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  5. Potri.014G000400

Potri.014G000400


Description : high chlorophyll fluorescence phenotype 173


Gene families : OG_42_0005535 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.014G000400
Cluster HCCA clusters: cluster_0018

Target Alias Description ECC score Gene Family Method Actions
183274 No alias high chlorophyll fluorescence phenotype 173 0.02 Orthogroups_2024-Update
At1g16720 No alias high chlorophyll fluorescence phenotype 173... 0.03 Orthogroups_2024-Update
Bradi1g34525 No alias high chlorophyll fluorescence phenotype 173 0.05 Orthogroups_2024-Update
Brara.F01166.1 No alias protein involved in PS-II assembly *(HCF173) 0.03 Orthogroups_2024-Update
Glyma.07G000500 No alias high chlorophyll fluorescence phenotype 173 0.03 Orthogroups_2024-Update
Glyma.08G226600 No alias high chlorophyll fluorescence phenotype 173 0.05 Orthogroups_2024-Update
LOC_Os02g04510 No alias UOS1, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g04800.1 No alias HCF173 protein involved in PS-II assembly 0.02 Orthogroups_2024-Update
Pp1s326_65V6 No alias F17F16.7; expressed protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Seita.1G093200.1 No alias protein involved in PS-II assembly *(HCF173) 0.04 Orthogroups_2024-Update
Seita.4G271300.1 No alias protein involved in PS-II assembly *(HCF173) 0.02 Orthogroups_2024-Update
Sobic.010G255300.2 No alias protein involved in PS-II assembly *(HCF173) 0.04 Orthogroups_2024-Update
Solyc08g016080 No alias high chlorophyll fluorescence phenotype 173 (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen08g006330 No alias NADH(P)-binding 0.07 Orthogroups_2024-Update
evm.model.tig00020830.55 No alias (at1g16720 : 103.0) Encodes HCF173, a protein with weak... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 155 248
IPR016040 NAD(P)-bd_dom 455 536
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 302 398
No external refs found!