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  5. Potri.015G029000

Potri.015G029000


Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.015G029000
Cluster HCCA clusters: cluster_0018

Target Alias Description ECC score Gene Family Method Actions
At2g32940 No alias Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771] 0.03 Orthogroups_2024-Update
GRMZM2G059033 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
Glyma.15G126700 No alias Argonaute family protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G031130.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G038830.1 No alias siRNA-integrating factor *(AGO) 0.03 Orthogroups_2024-Update
LOC_Os02g45070 No alias PINHEAD, putative, expressed 0.04 Orthogroups_2024-Update
MA_594g0010 No alias (at1g48410 : 1189.0) Encodes an RNA Slicer that... 0.03 Orthogroups_2024-Update
PSME_00001016-RA No alias (at5g43810 : 1422.0) Encodes a member of the EIF2C... 0.03 Orthogroups_2024-Update
Pp1s19_179V6 No alias argonaute protein group 0.02 Orthogroups_2024-Update
Seita.7G201100.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 Orthogroups_2024-Update
Solyc03g098280 No alias Argonaute 1b 0.03 Orthogroups_2024-Update
Solyc03g111760 No alias Argonaute15 0.02 Orthogroups_2024-Update
Solyc06g073540 No alias Argonaute4b 0.04 Orthogroups_2024-Update
Solyc12g006790 No alias Argonaute10b 0.04 Orthogroups_2024-Update
Sopen01g006840 No alias Piwi domain 0.03 Orthogroups_2024-Update
Sopen06g029900 No alias Piwi domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR014811 ArgoL1 159 208
IPR003165 Piwi 502 821
IPR032474 Argonaute_N 16 149
IPR003100 PAZ_dom 214 340
IPR032473 Argonaute_Mid_dom 408 482
IPR032472 ArgoL2 351 397
No external refs found!