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  5. Potri.015G033900

Potri.015G033900


Description : cyclic nucleotide-binding transporter 1


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.015G033900
Cluster HCCA clusters: cluster_0008

Target Alias Description ECC score Gene Family Method Actions
A4A49_17367 No alias cyclic nucleotide-gated ion channel 1 0.03 Orthogroups_2024-Update
A4A49_18102 No alias cyclic nucleotide-gated ion channel 1 0.05 Orthogroups_2024-Update
A4A49_20339 No alias cyclic nucleotide-gated ion channel 4 0.04 Orthogroups_2024-Update
A4A49_32794 No alias cyclic nucleotide-gated ion channel 1 0.03 Orthogroups_2024-Update
A4A49_33570 No alias putative cyclic nucleotide-gated ion channel 18 0.03 Orthogroups_2024-Update
At1g19780 No alias Putative cyclic nucleotide-gated ion channel 8... 0.04 Orthogroups_2024-Update
At2g24610 No alias cyclic nucleotide-gated channel 14 [Source:TAIR;Acc:AT2G24610] 0.04 Orthogroups_2024-Update
Bradi1g46260 No alias cyclic nucleotide-binding transporter 1 0.01 Orthogroups_2024-Update
Brara.A02980.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.E02422.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Brara.J00905.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
GRMZM2G074317 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
Glyma.06G184000 No alias cyclic nucleotide-gated channel 16 0.04 Orthogroups_2024-Update
Glyma.08G219300 No alias cyclic nucleotide gated channel 8 0.03 Orthogroups_2024-Update
Glyma.16G025400 No alias cyclic nucleotide-gated channel 13 0.01 Orthogroups_2024-Update
HORVU5Hr1G065950.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Kfl00280_0030 kfl00280_0030_v1.1 (at5g15410 : 444.0) 'defense, no death' gene (DND1)... 0.01 Orthogroups_2024-Update
LOC_Os02g41710 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g38580 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g06570 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
MA_167620g0010 No alias (at5g15410 : 804.0) 'defense, no death' gene (DND1)... 0.03 Orthogroups_2024-Update
Potri.001G407800 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
Potri.004G212300 No alias cyclic nucleotide-gated channel 15 0.03 Orthogroups_2024-Update
Pp1s90_245V6 No alias cyclic nucleotide-gated ion 0.02 Orthogroups_2024-Update
Seita.4G168400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.7G259800.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc05g050350 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.04 Orthogroups_2024-Update
Solyc09g007840 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.03 Orthogroups_2024-Update
Sopen02g033280 No alias Cyclic nucleotide-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 207 527
No external refs found!