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  5. Potri.015G103900

Potri.015G103900


Description : Matrixin family protein


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.015G103900
Cluster HCCA clusters: cluster_0008

Target Alias Description ECC score Gene Family Method Actions
A4A49_17533 No alias metalloendoproteinase 3-mmp 0.04 Orthogroups_2024-Update
At1g24140 No alias Metalloendoproteinase 3-MMP... 0.03 Orthogroups_2024-Update
At2g45040 No alias Metalloendoproteinase 4-MMP... 0.03 Orthogroups_2024-Update
Brara.G02449.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.04 Orthogroups_2024-Update
Brara.I01579.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.04 Orthogroups_2024-Update
GRMZM2G110220 No alias matrix metalloproteinase 0.02 Orthogroups_2024-Update
Glyma.01G036900 No alias Matrixin family protein 0.01 Orthogroups_2024-Update
Glyma.01G037200 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.02G028000 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.02G028200 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.18G131300 No alias matrix metalloproteinase 0.04 Orthogroups_2024-Update
LOC_Os02g50730 No alias metalloendoproteinase 1 precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g13180 No alias metalloendoproteinase 1 precursor, putative, expressed 0.04 Orthogroups_2024-Update
MA_10426152g0010 No alias (at1g24140 : 249.0) Matrixin family protein; FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00057126-RA No alias (at1g70170 : 290.0) mutant has Late flowering; Early... 0.03 Orthogroups_2024-Update
Potri.002G142500 No alias Matrixin family protein 0.04 Orthogroups_2024-Update
Potri.008G027600 No alias Matrixin family protein 0.04 Orthogroups_2024-Update
Potri.008G027700 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Sobic.004G243000.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.02 Orthogroups_2024-Update
Solyc08g078550 No alias Metalloendoproteinase 1, putative (AHRD V3.3 *** B9T8P6_RICCO) 0.02 Orthogroups_2024-Update
Solyc10g018750 No alias Metalloendoproteinase 1, putative (AHRD V3.3 *-* B9RD50_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0031012 extracellular matrix IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 71 123
IPR001818 Pept_M10_metallopeptidase 170 328
No external refs found!