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  5. Potri.015G105400

Potri.015G105400


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0007676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.015G105400
Cluster HCCA clusters: cluster_0057

Target Alias Description ECC score Gene Family Method Actions
Bradi1g51377 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Sopen03g037190 No alias PPR repeat family 0.02 Orthogroups_2024-Update
evm.model.tig00001623.10 No alias (at5g04810 : 174.0) pentatricopeptide (PPR)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 476 507
IPR002885 Pentatricopeptide_repeat 795 842
IPR002885 Pentatricopeptide_repeat 867 910
IPR002885 Pentatricopeptide_repeat 654 703
IPR002885 Pentatricopeptide_repeat 584 632
IPR002885 Pentatricopeptide_repeat 409 458
IPR002885 Pentatricopeptide_repeat 725 772
IPR002885 Pentatricopeptide_repeat 514 563
IPR002885 Pentatricopeptide_repeat 339 388
IPR002885 Pentatricopeptide_repeat 269 317
IPR002885 Pentatricopeptide_repeat 237 267
IPR002885 Pentatricopeptide_repeat 169 197
IPR002885 Pentatricopeptide_repeat 956 1008
No external refs found!