Potri.016G018300

Description : far-red elongated hypocotyls 3

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.016G018300
Cluster	HCCA clusters: cluster_0048

Target	Alias	Description	ECC score	Gene Family Method
HORVU2Hr1G102940.1	No alias	FRS/FRF-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G374300.2	No alias	FRS/FRF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc06g068210	No alias	Protein FAR1-RELATED SEQUENCE 8 (AHRD V3.3 *** W9RSB0_9ROSA)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004330	FAR1_DNA_bnd_dom	85	186
IPR018289	MULE_transposase_dom	285	376
IPR007527	Znf_SWIM	577	600

External Links

No external refs found!