Potri.017G035100


Description : OPC-8:0 CoA ligase1


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.017G035100
Cluster HCCA clusters: cluster_0114

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G018190.6 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_103893g0010 No alias (at1g20510 : 417.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00010615-RA No alias (at1g20510 : 540.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00013809-RA No alias (at1g20510 : 678.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.04 Orthogroups_2024-Update
PSME_00015569-RA No alias (o24146|4cl2_tobac : 689.0) 4-coumarate--CoA ligase 2... 0.02 Orthogroups_2024-Update
PSME_00019640-RA No alias (at1g20510 : 494.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
Potri.001G036900 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
Seita.1G065800.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Seita.9G537100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G062500.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Sopen03g030320 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025110 AMP-bd_C 56 131
IPR000873 AMP-dep_Synth/Lig 1 47
No external refs found!