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  5. Potri.017G089900

Potri.017G089900


Description : Cyclic nucleotide-regulated ion channel family protein


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.017G089900
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
84488 No alias cyclic nucleotide-gated cation channel 4 0.02 Orthogroups_2024-Update
At1g01340 No alias Probable cyclic nucleotide-gated ion channel 10... 0.03 Orthogroups_2024-Update
At5g53130 No alias Cyclic nucleotide-gated ion channel 1... 0.03 Orthogroups_2024-Update
Brara.A02981.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.C03656.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Glyma.06G184000 No alias cyclic nucleotide-gated channel 16 0.03 Orthogroups_2024-Update
Glyma.07G022500 No alias cyclic nucleotide gated channel 8 0.04 Orthogroups_2024-Update
Glyma.12G175000 No alias cyclic nucleotide-gated channel 15 0.02 Orthogroups_2024-Update
LOC_Os03g55100 No alias cyclic nucleotide-gated ion channel 2, putative, expressed 0.03 Orthogroups_2024-Update
Mp3g14660.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Orthogroups_2024-Update
Seita.1G240900.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Solyc03g098210 No alias Cyclic nucleotide gated channel CNGC15 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc05g050360 No alias cyclic nucleotide gated channel 1 (AHRD V3.3 *** AT5G53130.1) 0.03 Orthogroups_2024-Update
Sopen05g028790 No alias Ion transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 538 626
IPR005821 Ion_trans_dom 112 436
No external refs found!