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  5. Sopen12g031590

Sopen12g031590


Description : Ring finger domain


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g031590
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
A4A49_20151 No alias putative ring-h2 finger protein atl61 0.03 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.02 Orthogroups_2024-Update
A4A49_27114 No alias ring-h2 finger protein atl54 0.05 Orthogroups_2024-Update
A4A49_30300 No alias ring-h2 finger protein atl54 0.05 Orthogroups_2024-Update
A4A49_30512 No alias ring-h2 finger protein atl54 0.03 Orthogroups_2024-Update
A4A49_36993 No alias ring-h2 finger protein atl52 0.03 Orthogroups_2024-Update
A4A49_38307 No alias ring-h2 finger protein atl11 0.03 Orthogroups_2024-Update
At1g53820 No alias RING-H2 finger protein ATL60... 0.02 Orthogroups_2024-Update
At5g10380 No alias E3 ubiquitin-protein ligase RING1... 0.02 Orthogroups_2024-Update
Bradi1g46750 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g45890 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g25745 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.A03045.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.A03736.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.B02267.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.D02285.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F03530.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I00473.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.J02673.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
GRMZM2G004519 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G145382 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G171277 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G340444 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G460958 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G215600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G067900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G140800 No alias carbon/nitrogen insensitive 1 0.02 Orthogroups_2024-Update
Glyma.12G208600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G050900 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
HORVU6Hr1G077610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Kfl00066_0030 kfl00066_0030_v1.1 (at1g23980 : 83.2) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
Kfl00212_0070 kfl00212_0070_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
LOC_Os01g64620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g35144 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g52210 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g48310 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g50100 No alias RING-H2 finger protein ATL5G, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g34870 No alias Zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
MA_191025g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_38494g0010 No alias (at1g49230 : 119.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_786911g0010 No alias (at1g53820 : 92.8) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.04 Orthogroups_2024-Update
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Orthogroups_2024-Update
PSME_00057213-RA No alias (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
Potri.003G073300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G036800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G111900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G136200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G057700 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.019G091400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.4G172100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G336200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G345400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.003G147301.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G181200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G181300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G187600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G358200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.006G100200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G175600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G168900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G071000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc03g123680 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G72310.1) 0.03 Orthogroups_2024-Update
Solyc04g014220 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.04 Orthogroups_2024-Update
Solyc12g087840 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc12g087860 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc12g094690 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen09g005360 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g001300 No alias Ring finger domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 142
No external refs found!