Description : Histone superfamily protein
Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Populus release: Potri.T159501 | |
Cluster | HCCA clusters: cluster_0019 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
438193 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
A4A49_57080 | No alias | histone h3.2 | 0.03 | Orthogroups_2024-Update | |
A4A49_61103 | No alias | histone h3.2 | 0.03 | Orthogroups_2024-Update | |
Brara.B00354.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
Brara.C00416.1 | No alias | histone *(H3) | 0.04 | Orthogroups_2024-Update | |
Brara.D00649.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
Brara.I01745.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
Cre06.g274000 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre06.g276850 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre12.g504650 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre12.g506300 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre12.g506500 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre13.g569950 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre16.g661450 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre17.g708150 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre17.g709050 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
GRMZM2G176358 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.05G188600 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G245000 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G058490.4 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G090210.1 | No alias | histone *(H3) | 0.02 | Orthogroups_2024-Update | |
HORVU4Hr1G073150.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G031580.1 | No alias | histone *(H3) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G012820.2 | No alias | histone *(H3) | 0.02 | Orthogroups_2024-Update | |
MA_24261g0010 | No alias | (at5g10980 : 255.0) Histone superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_561217g0010 | No alias | (at5g65360 : 228.0) Histone superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
Sobic.010G047200.1 | No alias | histone *(H3) | 0.03 | Orthogroups_2024-Update | |
Solyc01g080600 | No alias | Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) | 0.02 | Orthogroups_2024-Update | |
Solyc02g077480 | No alias | Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) | 0.02 | Orthogroups_2024-Update | |
Solyc04g074580 | No alias | Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) | 0.03 | Orthogroups_2024-Update | |
Solyc04g081150 | No alias | Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) | 0.02 | Orthogroups_2024-Update | |
Solyc05g051500 | No alias | WEB family protein, chloroplastic (AHRD V3.3 *-*... | 0.02 | Orthogroups_2024-Update | |
Solyc12g056540 | No alias | Histone H3 (AHRD V3.3 *** K4DFY5_SOLLC) | 0.02 | Orthogroups_2024-Update | |
Sopen01g033540 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
Sopen12g029140 | No alias | Core histone H2A/H2B/H3/H4 | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_2255.2 | No alias | (at5g10980 : 218.0) Histone superfamily protein;... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 1 | 132 |
No external refs found! |