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Description : LHY1 [Source:UniProtKB/TrEMBL;Acc:A0A178W761]
Gene families : OG_42_0008557 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008557_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At1g01060 | |
| Cluster | HCCA clusters: Cluster_113 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 166821 | No alias | Homeodomain-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| A4A49_29102 | No alias | protein lhy | 0.07 | Orthogroups_2024-Update | |
| Bradi3g16515 | No alias | Homeodomain-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Brara.H03122.1 | No alias | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.07 | Orthogroups_2024-Update | |
| Brara.J00076.1 | No alias | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.06 | Orthogroups_2024-Update | |
| GRMZM2G474769 | No alias | Homeodomain-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.07G048500 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G070870.4 | No alias | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.02 | Orthogroups_2024-Update | |
| Potri.002G180800 | No alias | Homeodomain-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.014G106800 | No alias | Homeodomain-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Seita.6G055700.1 | No alias | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.05 | Orthogroups_2024-Update | |
| Sobic.007G047400.1 | No alias | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.03 | Orthogroups_2024-Update | |
| Solyc10g005080 | No alias | Late elongated hypocotyl (AHRD V3.3 *** J9PV71_NICAT) | 0.1 | Orthogroups_2024-Update | |
| Sopen10g001100 | No alias | Myb-like DNA-binding domain | 0.1 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Predicted GO |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0004556 | alpha-amylase activity | IEP | Predicted GO |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Predicted GO |
| MF | GO:0005253 | anion channel activity | IEP | Predicted GO |
| MF | GO:0005254 | chloride channel activity | IEP | Predicted GO |
| MF | GO:0005319 | lipid transporter activity | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| BP | GO:0006595 | polyamine metabolic process | IEP | Predicted GO |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006597 | spermine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0006821 | chloride transport | IEP | Predicted GO |
| BP | GO:0006869 | lipid transport | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| BP | GO:0008215 | spermine metabolic process | IEP | Predicted GO |
| BP | GO:0008216 | spermidine metabolic process | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | Predicted GO |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Predicted GO |
| BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Predicted GO |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Predicted GO |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | Predicted GO |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
| MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Predicted GO |
| BP | GO:0061024 | membrane organization | IEP | Predicted GO |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0071949 | FAD binding | IEP | Predicted GO |
| BP | GO:0097164 | ammonium ion metabolic process | IEP | Predicted GO |
| BP | GO:0120009 | intermembrane lipid transfer | IEP | Predicted GO |
| MF | GO:0120013 | intermembrane lipid transfer activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 24 | 67 |
| No external refs found! |