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  5. AC187551.3_FG002

AC187551.3_FG002


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000934 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC187551.3_FG002
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Bradi2g13480 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
MA_6218g0010 No alias (at1g77360 : 229.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00021412-RA No alias (at3g62470 : 474.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
Potri.010G114700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G081300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g008330 No alias Pentatricopeptide repeat protein (AHRD V3.3 *** D2STE8_GOSHI) 0.02 Orthogroups_2024-Update
Sopen05g004160 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0032465 regulation of cytokinesis IEP Predicted GO
BP GO:0032954 regulation of cytokinetic process IEP Predicted GO
BP GO:0032955 regulation of division septum assembly IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0051302 regulation of cell division IEP Predicted GO
BP GO:1901891 regulation of cell septum assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 542 570
IPR002885 Pentatricopeptide_repeat 297 322
IPR002885 Pentatricopeptide_repeat 265 291
IPR002885 Pentatricopeptide_repeat 456 514
IPR002885 Pentatricopeptide_repeat 327 375
IPR002885 Pentatricopeptide_repeat 401 444
No external refs found!