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GRMZM2G003988


Description : LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein


Gene families : OG_42_0000820 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G003988
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31850 No alias ALA-interacting subunit 1 0.03 Orthogroups_2024-Update
Bradi4g37980 No alias ALA-interacting subunit 1 0.02 Orthogroups_2024-Update
GRMZM2G180211 No alias LEM3 (ligand-effect modulator 3) family protein / CDC50... 0.03 Orthogroups_2024-Update
Glyma.08G234600 No alias LEM3 (ligand-effect modulator 3) family protein / CDC50... 0.05 Orthogroups_2024-Update
Glyma.15G212400 No alias LEM3 (ligand-effect modulator 3) family protein / CDC50... 0.02 Orthogroups_2024-Update
HORVU1Hr1G081400.2 No alias regulatory component *(ALIS) of ALA-ALIS flippase... 0.03 Orthogroups_2024-Update
HORVU6Hr1G031530.1 No alias regulatory component *(ALIS) of ALA-ALIS flippase... 0.03 Orthogroups_2024-Update
Potri.011G082100 No alias LEM3 (ligand-effect modulator 3) family protein / CDC50... 0.02 Orthogroups_2024-Update
Seita.1G069600.1 No alias regulatory component *(ALIS) of phospholipid flippase... 0.05 Orthogroups_2024-Update
Seita.2G308100.1 No alias regulatory component *(ALIS) of phospholipid flippase... 0.02 Orthogroups_2024-Update
Sobic.002G296800.3 No alias regulatory component *(ALIS) of ALA-ALIS flippase... 0.03 Orthogroups_2024-Update
Sobic.004G058500.1 No alias regulatory component *(ALIS) of ALA-ALIS flippase... 0.06 Orthogroups_2024-Update
Solyc05g054800 No alias LEM3 (Ligand-effect modulator 3) family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005045 CDC50/LEM3_fam 69 333
No external refs found!