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  5. GRMZM2G004888

GRMZM2G004888


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0012456 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012456_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G004888
Cluster HCCA clusters: Cluster_77


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 614 661
IPR002885 Pentatricopeptide_repeat 350 382
IPR002885 Pentatricopeptide_repeat 156 187
IPR032867 DYW_dom 787 911
IPR002885 Pentatricopeptide_repeat 325 349
IPR002885 Pentatricopeptide_repeat 291 314
IPR002885 Pentatricopeptide_repeat 99 122
IPR002885 Pentatricopeptide_repeat 66 85
IPR002885 Pentatricopeptide_repeat 189 218
IPR002885 Pentatricopeptide_repeat 516 543
IPR002885 Pentatricopeptide_repeat 40 60
IPR002885 Pentatricopeptide_repeat 485 511
IPR002885 Pentatricopeptide_repeat 385 413
IPR002885 Pentatricopeptide_repeat 757 783
No external refs found!