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GRMZM2G007939


Description : chloroplast beta-amylase


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G007939
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
A4A49_37406 No alias inactive beta-amylase 9 0.03 Orthogroups_2024-Update
At5g18670 No alias Inactive beta-amylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYW2] 0.02 Orthogroups_2024-Update
Bradi1g18390 No alias beta-amylase 3 0.02 Orthogroups_2024-Update
Brara.C03939.1 No alias EC_3.2 glycosylase & beta amylase 0.04 Orthogroups_2024-Update
Brara.J01703.1 No alias beta amylase & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Glyma.05G068000 No alias chloroplast beta-amylase 0.05 Orthogroups_2024-Update
Glyma.09G168300 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Glyma.13G215000 No alias beta-amylase 3 0.03 Orthogroups_2024-Update
Glyma.15G098100 No alias beta-amylase 3 0.03 Orthogroups_2024-Update
Glyma.16G217900 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Glyma.17G150100 No alias chloroplast beta-amylase 0.04 Orthogroups_2024-Update
HORVU1Hr1G055140.1 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Kfl00034_0040 kfl00034_0040_v1.1 (at3g23920 : 514.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
LOC_Os07g47120 No alias beta-amylase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g41550 No alias beta-amylase, putative, expressed 0.03 Orthogroups_2024-Update
Mp4g04500.1 No alias beta amylase 0.03 Orthogroups_2024-Update
PSME_00015760-RA No alias (at3g23920 : 407.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
PSME_00031599-RA No alias (at5g18670 : 428.0) putative beta-amylase BMY3 (BMY3);... 0.03 Orthogroups_2024-Update
PSME_00053865-RA No alias (at3g23920 : 404.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
Sobic.001G293800.1 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.004G027800.2 No alias EC_3.2 glycosylase & BZR-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g067660 No alias 1,4-alpha-glucan-maltohydrolase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA InterProScan predictions
MF GO:0016161 beta-amylase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0070876 SOSS complex IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 89 503
No external refs found!