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  5. At1g11580

At1g11580


Description : methylesterase PCR A [Source:TAIR;Acc:AT1G11580]


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g11580
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_30246 No alias putative pectinesterasepectinesterase inhibitor 28 0.03 Orthogroups_2024-Update
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.03 Orthogroups_2024-Update
At2g26440 No alias Probable pectinesterase/pectinesterase inhibitor 12... 0.04 Orthogroups_2024-Update
Bradi1g16780 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Bradi2g52140 No alias methylesterase PCR A 0.03 Orthogroups_2024-Update
Brara.C02457.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.06 Orthogroups_2024-Update
Brara.F02072.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I03256.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Brara.J00839.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G060400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.07G046033 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Glyma.09G232100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.13G115300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
MA_10434624g0020 No alias (at1g53830 : 387.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
MA_10435891g0010 No alias (o04887|pme2_citsi : 389.0) Pectinesterase-2 precursor... 0.03 Orthogroups_2024-Update
MA_354248g0010 No alias (at3g49220 : 511.0) Plant invertase/pectin... 0.02 Orthogroups_2024-Update
MA_9367g0020 No alias (o04886|pme1_citsi : 511.0) Pectinesterase-1 precursor... 0.03 Orthogroups_2024-Update
PSME_00033188-RA No alias (at5g53370 : 514.0) pectin methylesterase PCR fragment F... 0.02 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.05 Orthogroups_2024-Update
Potri.003G072800 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.03 Orthogroups_2024-Update
Potri.015G127500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Seita.3G370800.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.002G210700.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc03g083360 No alias Pectinesterase (AHRD V3.3 *** K4BIB2_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
MF GO:0015926 glucosidase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0090599 alpha-glucosidase activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 56 203
IPR000070 Pectinesterase_cat 246 542
No external refs found!