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  5. GRMZM2G017087

GRMZM2G017087


Description : KNOTTED-like from Arabidopsis thaliana


Gene families : OG_42_0000234 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G017087
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_11478 No alias homeobox protein knotted-1-like 6 0.04 Orthogroups_2024-Update
A4A49_37821 No alias homeobox protein knotted-1-like let12 0.03 Orthogroups_2024-Update
Brara.F02723.1 No alias KNOX-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I01459.1 No alias KNOX-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I03233.1 No alias KNOX-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.04G064100 No alias KNOTTED1-like homeobox gene 3 0.03 Orthogroups_2024-Update
Glyma.10G147000 No alias KNOTTED1-like homeobox gene 6 0.03 Orthogroups_2024-Update
Glyma.18G083100 No alias KNOTTED1-like homeobox gene 5 0.04 Orthogroups_2024-Update
LOC_Os03g03164 No alias homeobox protein knotted-1, putative, expressed 0.02 Orthogroups_2024-Update
Potri.004G004700 No alias KNOX/ELK homeobox transcription factor 0.02 Orthogroups_2024-Update
Potri.005G017200 No alias KNOTTED1-like homeobox gene 6 0.02 Orthogroups_2024-Update
Solyc05g005090 No alias Knotted-1 homeobox protein (AHRD V3.3 *** R9R650_9FABA) 0.02 Orthogroups_2024-Update
Sopen08g012000 No alias KNOX2 domain 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005539 ELK_dom 242 263
IPR005541 KNOX2 158 203
IPR005540 KNOX1 103 144
IPR008422 Homeobox_KN_domain 282 321
No external refs found!