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  5. GRMZM2G018020

GRMZM2G018020


Description : spliceosomal protein U1A


Gene families : OG_42_0003063 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G018020
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G055040.1 No alias component *(U2B) of U2 snRNP complex 0.03 Orthogroups_2024-Update
Seita.9G436100.1 No alias component *(U2B) of U2 snRNP complex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 182 243
IPR000504 RRM_dom 24 94
No external refs found!