GRMZM2G035118

Description : pumilio 5

Gene families : OG_42_0003031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003031_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G035118
Cluster	HCCA clusters: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.13G099300	No alias	pumilio 5	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	Predicted GO
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	IEP	Predicted GO
BP	GO:0006144	purine nucleobase metabolic process	IEP	Predicted GO
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predicted GO
BP	GO:0009112	nucleobase metabolic process	IEP	Predicted GO
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	Predicted GO
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0046112	nucleobase biosynthetic process	IEP	Predicted GO
BP	GO:0046148	pigment biosynthetic process	IEP	Predicted GO
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	803	832
IPR001313	Pumilio_RNA-bd_rpt	839	871
IPR001313	Pumilio_RNA-bd_rpt	768	792
IPR001313	Pumilio_RNA-bd_rpt	658	689
IPR001313	Pumilio_RNA-bd_rpt	875	900
IPR001313	Pumilio_RNA-bd_rpt	919	949
IPR001313	Pumilio_RNA-bd_rpt	730	759
IPR001313	Pumilio_RNA-bd_rpt	694	726

External Links

No external refs found!