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  5. GRMZM2G041141

GRMZM2G041141


Description : plant U-box 26


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G041141
Cluster HCCA clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Bradi1g44390 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Brara.A02878.1 No alias U-Box-group-III E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.D00589.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Glyma.04G212300 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Glyma.07G106000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G147200 No alias CYS, MET, PRO, and GLY protein 2 0.03 Orthogroups_2024-Update
Glyma.12G095100 No alias plant U-box 23 0.02 Orthogroups_2024-Update
LOC_Os04g35680 No alias U-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g49970 No alias U-box, putative, expressed 0.02 Orthogroups_2024-Update
MA_415393g0010 No alias (at3g19380 : 146.0) plant U-box 25 (PUB25); FUNCTIONS... 0.03 Orthogroups_2024-Update
MA_83739g0020 No alias (at1g49780 : 403.0) plant U-box 26 (PUB26); FUNCTIONS... 0.05 Orthogroups_2024-Update
PSME_00046041-RA No alias "(at5g64660 : 307.0) ""CYS, MET, PRO, and GLY protein... 0.03 Orthogroups_2024-Update
PSME_00056516-RA No alias (at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.03 Orthogroups_2024-Update
Potri.007G110600 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G016200 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Potri.014G101100 No alias plant U-box 23 0.04 Orthogroups_2024-Update
Potri.017G135000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Seita.9G474100.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g005160 No alias Avr9/Cf-9 rapidly elicited protein 1 0.04 Orthogroups_2024-Update
Solyc01g007010 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc01g107980 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc04g008100 No alias U-box domain-containing protein (AHRD V3.3 *** A0A0A0RAL4_9ROSI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 18 89
No external refs found!