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GRMZM2G045084


Description : RING-H2 finger C2A


Gene families : OG_42_0001974 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G045084
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G338400 No alias RING-H2 finger C2A 0.06 Orthogroups_2024-Update
HORVU7Hr1G055010.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os05g01940 No alias zinc finger, RING-type, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.001G422900.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 7 36
IPR010543 DUF1117 192 275
IPR001841 Znf_RING 134 176
No external refs found!