GRMZM2G056120


Description : Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G056120
Cluster HCCA clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
At1g77850 No alias auxin response factor 17 [Source:TAIR;Acc:AT1G77850] 0.04 Orthogroups_2024-Update
At3g61830 No alias Auxin response factor 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5W9] 0.03 Orthogroups_2024-Update
Bradi5g25767 No alias auxin response factor 6 0.04 Orthogroups_2024-Update
Brara.A01401.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E00126.1 No alias ARF-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G073750 No alias auxin response factor 6 0.03 Orthogroups_2024-Update
Glyma.06G164900 No alias auxin response factor 2 0.04 Orthogroups_2024-Update
Glyma.11G145500 No alias auxin response factor 10 0.04 Orthogroups_2024-Update
Glyma.12G164100 No alias auxin response factor 1 0.04 Orthogroups_2024-Update
HORVU5Hr1G054640.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os12g29520 No alias auxin response factor, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g07070.1 No alias transcription factor (ARF) 0.02 Orthogroups_2024-Update
PSME_00020341-RA No alias (at1g19220 : 630.0) Encodes an auxin response factor... 0.03 Orthogroups_2024-Update
Potri.003G142100 No alias auxin response factor 9 0.03 Orthogroups_2024-Update
Potri.003G163600 No alias auxin response factor 2 0.03 Orthogroups_2024-Update
Potri.011G091900 No alias auxin response factor 6 0.03 Orthogroups_2024-Update
Pp1s280_7V6 No alias arf1-binding protein 0.02 Orthogroups_2024-Update
Seita.1G090900.1 No alias ARF-type transcription factor & auxin signal mediator... 0.03 Orthogroups_2024-Update
Seita.1G241500.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.7G108100.1 No alias ARF-type transcription factor 0.04 Orthogroups_2024-Update
Seita.8G135700.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G073600.1 No alias ARF-type transcription factor & auxin signal mediator... 0.03 Orthogroups_2024-Update
Solyc03g031970 No alias Auxin response factor (AHRD V3.3 *** A0A191T8S7_SALMI) 0.03 Orthogroups_2024-Update
Sopen02g022450 No alias Auxin response factor 0.02 Orthogroups_2024-Update
evm.model.tig00020904.93 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0009725 response to hormone IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 128 229
IPR010525 Auxin_resp 255 334
No external refs found!